PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Spipo14G0014500
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Araceae; Lemnoideae; Spirodela
Family Dof
Protein Properties Length: 151aa    MW: 15606.8 Da    PI: 11.4239
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Spipo14G0014500genomeMIPS/IBISView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof40.94.4e-132372762
           zf-Dof 27 sqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                     + Pr +Ck+  r+Wt+GG+lr +P+G g rkn+k+s
  Spipo14G0014500  2 ASPRLLCKSRGRHWTRGGSLRSIPIGLGFRKNNKRS 37
                     67******************************9876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074782.0E-6135IPR003851Zinc finger, Dof-type
PfamPF027011.3E-8335IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 151 aa     Download sequence    Send to blast
MASPRLLCKS RGRHWTRGGS LRSIPIGLGF RKNNKRSAGA PSSMAKQSSN QPGLDARCPP  60
PPDQGAVSLC ASTSGIDDVM LNLLGSFTDL LSLHGHLRNI LGTFPGLALA FAGPSWWSNV  120
ASIFPGIFFG HGMGTRAASG TSSPSTCGIQ *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51700.12e-11DOF zinc finger protein 1